GetDetailedNbPeptidesUsed {DAPAR}R Documentation

Computes the detailed number of peptides used for aggregating each protein

Description

Method to compute the detailed number of quantified peptides used for aggregating each protein

Usage

GetDetailedNbPeptidesUsed(X, pepData)

Arguments

X

An adjacency matrix

pepData

A data.frame of quantitative data

Value

A list of two items

Author(s)

Samuel Wieczorek

utils::data(Exp1_R25_pept, package='DAPARdata') obj.pep <- Exp1_R25_pept[1:1000] protID <- "Protein_group_IDs" X <- BuildAdjacencyMatrix(obj.pep, protID, FALSE) GetDetailedNbPeptidesUsed(X, obj.pep)


[Package DAPAR version 1.22.9 Index]