getProteinsStats {DAPAR}R Documentation

Computes the number of proteins that are only defined by specific peptides, shared peptides or a mixture of two.

Description

This function computes the number of proteins that are only defined by specific peptides, shared peptides or a mixture of two.

Usage

getProteinsStats(matShared)

Arguments

matShared

The adjacency matrix with both specific and shared peptides.

Value

A list

Author(s)

Samuel Wieczorek

Examples

utils::data(Exp1_R25_pept, package='DAPARdata')
protID <- "Protein_group_IDs"
obj <- Exp1_R25_pept[1:1000]
MShared <- BuildAdjacencyMatrix(obj, protID, FALSE)
getProteinsStats(MShared)


[Package DAPAR version 1.22.9 Index]