runMclust {CytoTree}R Documentation

runMclust

Description

Model-based clustering based on parameterized finite Gaussian mixture models. This function is based on Mclust.

Usage

runMclust(object, scale = FALSE, verbose = FALSE, ...)

Arguments

object

a CYT object

scale

logical. Whether to use scaled data in Mclust.

verbose

logical. Whether to print calculation progress.

...

Parameters passing to Mclust function

Value

a CYT object with mclust.id in meta.data

See Also

Mclust

Examples


cyt.file <- system.file("extdata/cyt.rds", package = "CytoTree")
cyt <- readRDS(file = cyt.file)

cyt <- runMclust(cyt, verbose = TRUE)



[Package CytoTree version 1.0.3 Index]