fetchPlotMeta {CytoTree}R Documentation

Fetching plot metadata of CYT

Description

Fetching plot metadata of CYT

Usage

fetchPlotMeta(object, markers = NULL, verbose = FALSE)

Arguments

object

An CYT object

markers

vector. Makers fetched from expression matrix

verbose

logical. Whether to print calculation progress.

Value

a data.frame containing meta information for visualization

Examples


cyt.file <- system.file("extdata/cyt.rds", package = "CytoTree")
cyt <- readRDS(file = cyt.file)

plot.data <- fetchPlotMeta(cyt)
head(plot.data)

plot.data <- fetchPlotMeta(cyt, markers = c("CD43", "CD34"))
head(plot.data)





[Package CytoTree version 1.0.3 Index]