plotPseudotimeDensity {CytoTree} | R Documentation |
plot Pseudotime density of CYT
plotPseudotimeDensity( object, color.by = "stage", main = "Density of pseudotime", adjust = 0.5, plot.theme = theme_bw() )
object |
a CYT object |
color.by |
character. |
main |
character. Title of the plot |
adjust |
numeric. A multiplicate bandwidth adjustment. |
plot.theme |
themes from |
ggplot2 figure
cyt.file <- system.file("extdata/cyt.rds", package = "CytoTree") cyt <- readRDS(file = cyt.file) plotPseudotimeDensity(cyt) plotPseudotimeDensity(cyt, adjust = 1) plotPseudotimeDensity(cyt, adjust = 2)