changeMarker {CytoTree}R Documentation

Change marker used in the calculation of CYT

Description

Change marker used in the calculation of CYT

Usage

changeMarker(object, markers = NULL, verbose = FALSE)

Arguments

object

A CYT object

markers

vector. Markers used in the calculation of PCA, tSNE, diffusion map and UMAP.

verbose

logical. Whether to print calculation progress.

Value

A CYT object

Examples


cyt.file <- system.file("extdata/cyt.rds", package = "CytoTree")
cyt <- readRDS(file = cyt.file)

markers <- c("CD43", "CD34", "CD90", "CD45RA")

cyt <- changeMarker(cyt, markers = markers)


      

[Package CytoTree version 1.0.3 Index]