addClipped {CrispRVariants} | R Documentation |
Extrapolates the mapping location of a read by assuming that the clipped regions should map adjacent to the mapped locations. This is not always a good assumption, particularly in the case of chimeric reads!
addClipped(bam, ...) ## S4 method for signature 'GAlignments' addClipped(bam, ...)
bam |
A GAlignments object |
... |
additional arguments |
A GRanges
representation of the extended
mapping locations
Helen Lindsay