molecularProfiles {CoreGx}R Documentation

molecularProfiles Generic

Description

Generic for molecularProfiles method

Usage

molecularProfiles(object, mDataType, assay, ...)

Arguments

object

The CoreSet to retrieve molecular profiles from

mDataType

character The type of molecular data

assay

character Name of the desired assay; if excluded defaults to first assay in the SummarizedExperiment for the given mDataType. Use assayNames(molecularProfiles(object, dataType) to check which assays are available for a given molecular datatype.

...

Fallthrough arguements for defining new methods

Value

a matrix of data for the given mDataType and assay

Examples

data(clevelandSmall_cSet)
molecularProfiles(clevelandSmall_cSet, "rna")


[Package CoreGx version 1.2.0 Index]