beds_to_matrix_indexes {ChromSCape}R Documentation

Count bed files on interval to create count indexes

Description

Count bed files on interval to create count indexes

Usage

beds_to_matrix_indexes(files_dir, which)

Arguments

files_dir

Directory containing the single cell BAM files

which

Genomic Range on which to count

Value

A list containing a "feature index" data.frame and a names of cells as vector both used to form the sparse matrix


[Package ChromSCape version 1.0.0 Index]