num_cell_after_QC_filt_scExp {ChromSCape}R Documentation

Table of cells before / after QC

Description

Table of cells before / after QC

Usage

num_cell_after_QC_filt_scExp(scExp, annot)

Arguments

scExp

A SingleCellExperiment object.

annot

A raw annotation data.frame of cells before filtering.

Value

A formatted kable in HTML.

Examples

scExp = create_scExp(create_scDataset_raw()$mat,create_scDataset_raw()$annot)
scExp_filtered = filter_scExp(scExp)
## Not run:  num_cell_after_QC_filt_scExp(
scExp_filtered,SingleCellExperiment::colData(scExp))
## End(Not run)


[Package ChromSCape version 1.0.0 Index]