plot_heatmap_scExp {ChromSCape} | R Documentation |
Plot cell correlation heatmap with annotations
plot_heatmap_scExp( scExp, name_hc = "hc_cor", corColors = (grDevices::colorRampPalette(c("royalblue", "white", "indianred1")))(256), color_by = NULL )
scExp |
A SingleCellExperiment Object |
name_hc |
Name of the hclust contained in the SingleCellExperiment object |
corColors |
A palette of colors for the heatmap |
color_by |
Which features to add as additional bands on top of plot |
A heatmap of cell to cell correlation, grouping cells by hierarchical clustering.
data("scExp") plot_heatmap_scExp(scExp)