DA_one_vs_rest_fun {ChromSCape} | R Documentation |
Differential Analysis in 'One vs Rest' mode
DA_one_vs_rest_fun(affectation, nclust, counts, method, feature, block)
affectation |
An annotation data.frame with cell_id and cell_cluster columns |
nclust |
Number of clusters |
counts |
Count matrix |
method |
DA method : Wilcoxon or EdgeR |
feature |
Feature tables |
block |
Blocking feature |
A list of results, groups compared and references