crosstab_by_celltype {CellaRepertorium}R Documentation

Count contig UMIs by celltype

Description

Count contig UMIs by celltype

Usage

crosstab_by_celltype(ccdb)

Arguments

ccdb

A ContigCellDB object

Value

a table, keyed by cell_pk counting UMIs per celltype

See Also

guess_celltype()

Examples

data(ccdb_ex)
nrow(ccdb_ex$cell_tbl)
total_umi = crosstab_by_celltype(ccdb_ex)
nrow(total_umi)

[Package CellaRepertorium version 1.0.0 Index]