.fitDynamic_def {CellTrails}R Documentation

Fitting dynamics

Description

Fits expression as a function of pseudotime using generalized additive models

Usage

.fitDynamic_def(x, y, z, k = 5, n.out = NULL, x.out = NULL)

Arguments

x

Pseudotime values

y

Expression values

z

Sample states

k

Dimensions of the bases used to represent the smooth term

n.out

Number of predicted expression values within pseudotime range

x.out

Predicted expression values for given set of pseudotime values

Value

A list containing the following components:

x

Pseudotime

y

Fitted values

mod

GAM

Author(s)

Daniel C. Ellwanger


[Package CellTrails version 1.8.0 Index]