inSilicoCellModel {CancerInSilico}R Documentation

Simulates Cell Model

Description

Simulates Cell Model

Usage

inSilicoCellModel(initialNum, runTime, density,
  modelType = "DrasdoHohme", ...)

Arguments

initialNum

how many cells initially

runTime

how long the simulation runs in real cellular time (hours)

density

initial density of cell population

modelType

the name of the cell-based model to use

...

model specific parameters (depends on modelType)

Details

This function provides a centralized R interface to run c++ code for cell-based models implemented in this package. Standard parameters, as well as model-specific parameters, are passed in to this function along with a model name. This function then runs the model and returns a CellModel object containing all of the information from the model. This object can then be accessed with various functions designed to interact with the class. To see a list of available functions, there is a show() command implemented for CellModel objects.

Value

A CellModel containing all info from the model run

Examples

inSilicoCellModel(initialNum=1, runTime=8, density=0.1)

[Package CancerInSilico version 2.10.0 Index]