CAFE_data {CAFE} | R Documentation |
Contains the dataset of GSE6561 and GSE10809 processed by
ProcessCels
data("CAFE_data")
A list containing two lists
whole
A list containing a dataframe for each sample
over
A list containing a dataframe for each sample, but with only those probes that are deemed overexpressed
The dataframes inside the lists contain the following columns:
ID
Affymetrix probe IDs
Sym
Gene symbols
Value
Log2 transformed expression values
LogRel
Log2 transformed relative expression values (to the median)
Loc
Chromosomal locations
Chr
Chromosome identifiers
GSE6561: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE6561
GSE10809: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE10809
data("CAFE_data")