getRates {BiGGR}R Documentation

Get Optimized Rates

Description

getRates takes the model file as the argument and based on the description of the model file generates flux values for "minimum" or "maximum" reaction rates

Usage

getRates(modelFile)

Arguments

modelFile

The path to a LIM model file as generated for instance from the functions createLIMFromBiGG or createLIMFromSBML

Value

The value returned is one dimentional numeric vector of flux rates for each reaction

Author(s)

Anand K. Gavai <anand.gavai@bioinformatics.nl>

Examples

data("Glycolysis")
rates <-getRates(Glycolysis)
rates

[Package BiGGR version 1.26.0 Index]