setAnnotationFromObject {BgeeCall} | R Documentation |
Method of the class UserMetadata. Set annotation_object of one UserMetadata object by using one GRanges object as input.
setAnnotationFromObject(userObject, annotationObject, annotationName) ## S4 method for signature 'UserMetadata,GRanges,character' setAnnotationFromObject(userObject, annotationObject, annotationName = "")
userObject |
The UserMetadata object |
annotationObject |
object of thr GRanges S4 class |
annotationName |
(optional) Name of the annotation. Will be used to create folders. |
If no annotationName is provided the name of the file is used to create folders.
An object of the class UserMetadata
{ user <- new("UserMetadata") annotation_object <- rtracklayer::import(system.file("extdata", "annotation.gtf", package = "BgeeCall")) user <- setAnnotationFromObject(user, annotation_object, "annotation_name") }