estimateComplexity {AneuFinder}R Documentation

Estimate library complexity

Description

Estimate library complexity using a very simple "Michaelis-Menten" approach.

Usage

estimateComplexity(reads)

Arguments

reads

A GRanges-class object with read fragments. NOTE: Complexity estimation relies on duplicate reads and therefore the duplicates have to be present in the input.

Value

A list with estimated complexity values and plots.


[Package AneuFinder version 1.18.0 Index]