ImputeBaseline {ADImpute}R Documentation

Impute using average expression across all cells

Description

ImputeBaseline imputes dropouts using gene averages across cells. Zero values are excluded from the mean computation.

Usage

ImputeBaseline(data, write = FALSE, ...)

Arguments

data

matrix with entries equal to zero to be imputed, normalized and log2-transformed (genes as rows and samples as columns)

write

logical; should a file with the imputation results be written?

...

additional arguments to saveRDS

Value

matrix; imputation results considering the average expression values of genes


[Package ADImpute version 1.0.0 Index]