ImputeSAVER {ADImpute}R Documentation

Use SAVER

Description

ImputeSAVER uses the SAVER package for dropout imputation

Usage

ImputeSAVER(data, cores, try.mean = FALSE, write = FALSE)

Arguments

data

matrix with entries equal to zero to be imputed, normalized (genes as rows and samples as columns)

cores

integer; number of cores to use

try.mean

logical; whether to additionally use mean gene expression as prediction

write

logical; should a file with the imputation results be written?

Value

matrix; imputation results from SAVER

See Also

saver


[Package ADImpute version 1.0.0 Index]