imputeFlag {ABarray}R Documentation

Perform imputation for missing values (FLAG > 5000)

Description

Perform imputation for missing values.

Usage

imputeFlag(rawSig, pd = NULL, group = "", impute = "avg")

Arguments

rawSig

a matrix containing gene expression with missing values labeled as NA

pd

phenoData object

group

which group should average be performed

impute

choice of impute method, only avg (average) is implemented

Value

a list containing a matrix with the imputed values and rows that are imputed.

Author(s)

Y Andrew Sun

Examples

#-imputed <- imputeFlag(raw, pd, group = "tissue", impute = "avg")  ##- sn ratio matrix

[Package ABarray version 1.58.0 Index]