This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.
This package is for version 3.11 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see manta.
Bioconductor version: Release (3.11)
Tools for robust comparative metatranscriptomics.
Author: Ginger Armbrust, Adrian Marchetti
Maintainer: Chris Berthiaume <chrisbee at uw.edu>, Adrian Marchetti <amarchetti at unc.edu>
Citation (from within R,
enter citation("manta")
):
To install this package, start R (version "4.0") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("manta")
For older versions of R, please refer to the appropriate Bioconductor release.
Reference Manual |
biocViews | DataImport, DifferentialExpression, GeneExpression, Genetics, ImmunoOncology, QualityControl, RNASeq, Sequencing, Software, Visualization |
Version | 1.34.0 |
In Bioconductor since | BioC 2.10 (R-2.15) (8.5 years) |
License | Artistic-2.0 |
Depends | R (>= 1.8.0), methods, edgeR(>= 2.5.13) |
Imports | Hmisc, caroline (>= 0.6.6) |
LinkingTo | |
Suggests | RSQLite, plotrix |
SystemRequirements | |
Enhances | |
URL | http://manta.ocean.washington.edu/ |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | |
Windows Binary | |
macOS 10.13 (High Sierra) | |
Source Repository | git clone https://git.bioconductor.org/packages/manta |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/manta |
Package Short Url | https://bioconductor.org/packages/manta/ |
Package Downloads Report | Download Stats |
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