This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.
This package is for version 3.11 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see affypdnn.
Bioconductor version: Release (3.11)
The package contains functions to perform the PDNN method described by Li Zhang et al.
Author: H. Bjorn Nielsen and Laurent Gautier (Many thanks to Li Zhang early communications about the existence of the PDNN program and related publications).
Maintainer: Laurent Gautier<lgautier at gmail.com>
Citation (from within R,
enter citation("affypdnn")
):
To install this package, start R (version "4.0") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("affypdnn")
For older versions of R, please refer to the appropriate Bioconductor release.
Reference Manual |
biocViews | Microarray, OneChannel, Preprocessing, Software |
Version | 1.62.0 |
In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 15.5 years) |
License | LGPL |
Depends | R (>= 2.13.0), affy(>= 1.5) |
Imports | |
LinkingTo | |
Suggests | affydata, hgu95av2probe |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | |
Windows Binary | |
macOS 10.13 (High Sierra) | |
Source Repository | git clone https://git.bioconductor.org/packages/affypdnn |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/affypdnn |
Package Short Url | https://bioconductor.org/packages/affypdnn/ |
Package Downloads Report | Download Stats |
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