Bioconductor version: Release (3.11)
Data-adaptive test statistics represent a general methodology for performing multiple hypothesis testing on effects sizes while maintaining honest statistical inference when operating in high-dimensional settings (
Author: Weixin Cai [aut, cre, cph] , Nima Hejazi [aut] , Alan Hubbard [ctb, ths]
Maintainer: Weixin Cai <wcai at berkeley.edu>
Citation (from within R,
enter citation("adaptest")
):
To install this package, start R (version "4.0") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("adaptest")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("adaptest")
HTML | R Script | Data-Mining Biomarkers and High-Dimensional Testing |
Reference Manual | ||
Text | NEWS |
biocViews | DifferentialExpression, DimensionReduction, GeneExpression, Genetics, Microarray, MultipleComparison, Regression, Sequencing, Software |
Version | 1.7.1 |
In Bioconductor since | BioC 3.7 (R-3.5) (2.5 years) |
License | GPL-2 |
Depends | R (>= 3.6.0) |
Imports | methods, graphics, stats, utils, calibrate, origami (>= 1.0.0), SummarizedExperiment, S4Vectors, tmle |
LinkingTo | |
Suggests | Matrix, testthat, rmarkdown, knitr, BiocStyle, SuperLearner, earth, gam, nnls, airway |
SystemRequirements | |
Enhances | |
URL | https://github.com/wilsoncai1992/adaptest |
BugReports | https://github.com/wilsoncai1992/adaptest/issues |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | adaptest_1.7.1.tar.gz |
Windows Binary | adaptest_1.7.1.zip |
macOS 10.13 (High Sierra) | |
Source Repository | git clone https://git.bioconductor.org/packages/adaptest |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/adaptest |
Package Short Url | https://bioconductor.org/packages/adaptest/ |
Package Downloads Report | Download Stats |
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