Bioconductor version: Release (3.11)
Provides memory efficient S4 classes for storing sequences "externally" (e.g. behind an R external pointer, or on disk).
Author: Hervé Pagès and Patrick Aboyoun
Maintainer: Hervé Pagès <hpages at fredhutch.org>
Citation (from within R,
enter citation("XVector")
):
To install this package, start R (version "4.0") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("XVector")
For older versions of R, please refer to the appropriate Bioconductor release.
Reference Manual |
biocViews | DataRepresentation, Infrastructure, Software |
Version | 0.28.0 |
In Bioconductor since | BioC 2.13 (R-3.0) (7 years) |
License | Artistic-2.0 |
Depends | R (>= 2.8.0), methods, BiocGenerics(>= 0.19.2), S4Vectors(>= 0.25.14), IRanges(>= 2.21.6) |
Imports | methods, utils, zlibbioc, BiocGenerics, S4Vectors, IRanges |
LinkingTo | S4Vectors, IRanges |
Suggests | Biostrings, drosophila2probe, RUnit |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | Biostrings, motifRG, triplex |
Imports Me | BSgenome, ChIPsim, CNEr, compEpiTools, dada2, DECIPHER, gcrma, GenomicFeatures, GenomicRanges, Gviz, HiLDA, IONiseR, IsoformSwitchAnalyzeR, kebabs, MatrixRider, Modstrings, motifRG, ngsReports, R453Plus1Toolbox, ribosomeProfilingQC, Rsamtools, rtracklayer, Structstrings, TFBSTools, tracktables, tRNA, tRNAscanImport, VariantAnnotation |
Suggests Me | IRanges |
Links To Me | Biostrings, CNEr, DECIPHER, kebabs, MatrixRider, Rsamtools, rtracklayer, ShortRead, triplex, VariantAnnotation, VariantFiltering |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | XVector_0.28.0.tar.gz |
Windows Binary | XVector_0.28.0.zip (32- & 64-bit) |
macOS 10.13 (High Sierra) | XVector_0.28.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/XVector |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/XVector |
Package Short Url | https://bioconductor.org/packages/XVector/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.11 | Source Archive |
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