Bioconductor version: Release (3.11)
There is an increasing focus to investigate the association between rare variants and diseases. The REBET package implements the subREgion-based BurdEn Test which is a powerful burden test that simultaneously identifies susceptibility loci and sub-regions.
Author: Bill Wheeler [cre], Bin Zhu [aut], Lisa Mirabello [ctb], Nilanjan Chatterjee [ctb]
Maintainer: Bill Wheeler <wheelerb at imsweb.com>
Citation (from within R,
enter citation("REBET")
):
To install this package, start R (version "4.0") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("REBET")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("REBET")
R Script | REBET Vignette | |
Reference Manual | ||
Text | NEWS |
biocViews | SNP, Software, VariantAnnotation |
Version | 1.6.0 |
In Bioconductor since | BioC 3.8 (R-3.5) (2 years) |
License | GPL-2 |
Depends | ASSET |
Imports | stats, utils |
LinkingTo | |
Suggests | RUnit, BiocGenerics |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | REBET_1.6.0.tar.gz |
Windows Binary | REBET_1.6.0.zip (32- & 64-bit) |
macOS 10.13 (High Sierra) | REBET_1.6.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/REBET |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/REBET |
Package Short Url | https://bioconductor.org/packages/REBET/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.11 | Source Archive |
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