MCRestimate

DOI: 10.18129/B9.bioc.MCRestimate    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.11 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see MCRestimate.

Misclassification error estimation with cross-validation

Bioconductor version: Release (3.11)

This package includes a function for combining preprocessing and classification methods to calculate misclassification errors

Author: Marc Johannes, Markus Ruschhaupt, Holger Froehlich, Ulrich Mansmann, Andreas Buness, Patrick Warnat, Wolfgang Huber, Axel Benner, Tim Beissbarth

Maintainer: Marc Johannes <m.johannes at dkfz.de>

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MCRestimate")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	Classification, Software
Version	2.44.0
In Bioconductor since	BioC 1.6 (R-2.1) or earlier (> 15.5 years)
License	GPL (>= 2)
Depends	R (>= 2.7.2), golubEsets(>= 1.4.6)
Imports	e1071 (>= 1.5-12), pamr (>= 1.22), randomForest (>= 3.9-6), RColorBrewer (>= 0.1-3), Biobase(>= 2.5.5), graphics, grDevices, stats, utils
LinkingTo
Suggests	xtable (>= 1.2-1), ROC(>= 1.8.0), genefilter(>= 1.12.0), gpls(>= 1.6.0)
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary
macOS 10.13 (High Sierra)
Source Repository	git clone https://git.bioconductor.org/packages/MCRestimate
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/MCRestimate
Package Short Url	https://bioconductor.org/packages/MCRestimate/
Package Downloads Report	Download Stats