Bioconductor version: Release (3.11)
A package that provides a client interface to the KEGG REST server. Based on KEGGSOAP by J. Zhang, R. Gentleman, and Marc Carlson, and KEGG (python package) by Aurelien Mazurie.
Author: Dan Tenenbaum
Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>
Citation (from within R,
enter citation("KEGGREST")
):
To install this package, start R (version "4.0") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("KEGGREST")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("KEGGREST")
HTML | R Script | Accessing the KEGG REST API |
Reference Manual | ||
Text | NEWS |
biocViews | Annotation, KEGG, Pathways, Software, ThirdPartyClient |
Version | 1.28.0 |
In Bioconductor since | BioC 2.12 (R-3.0) (7.5 years) |
License | Artistic-2.0 |
Depends | |
Imports | methods, httr, png, Biostrings |
LinkingTo | |
Suggests | RUnit, BiocGenerics, knitr |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | Hiiragi2013, PAPi, ROntoTools |
Imports Me | ADAM, attract, BiocSet, CNEr, EnrichmentBrowser, FELLA, gage, KEGGlincs, KEGGprofile, MAGeCKFlute, MetaboSignal, MWASTools, NoRCE, PADOG, pathview, PathwaySplice, SMITE, YAPSA |
Suggests Me | globaltest |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | KEGGREST_1.28.0.tar.gz |
Windows Binary | KEGGREST_1.28.0.zip |
macOS 10.13 (High Sierra) | KEGGREST_1.28.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/KEGGREST |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/KEGGREST |
Package Short Url | https://bioconductor.org/packages/KEGGREST/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.11 | Source Archive |
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