Bioconductor version: Release (3.11)
Given a sample data table and a design formula, generate an interactive application to explore the resulting design matrix.
Author: Charlotte Soneson [aut, cre] , Federico Marini [aut] , Michael Love [aut] , Florian Geier [aut] , Michael Stadler [aut]
Maintainer: Charlotte Soneson <charlottesoneson at gmail.com>
Citation (from within R,
enter citation("ExploreModelMatrix")
):
To install this package, start R (version "4.0") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("ExploreModelMatrix")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ExploreModelMatrix")
HTML | R Script | ExploreModelMatrix |
HTML | R Script | ExploreModelMatrix-deploy |
Reference Manual | ||
Text | NEWS | |
Text | LICENSE |
biocViews | DifferentialExpression, ExperimentalDesign, Regression, Software |
Version | 1.0.2 |
In Bioconductor since | BioC 3.11 (R-4.0) (0.5 years) |
License | MIT + file LICENSE |
Depends | |
Imports | shiny, shinydashboard, DT, cowplot, utils, dplyr, magrittr, tidyr, ggplot2, stats, methods, rintrojs, scales, tibble, MASS, limma, S4Vectors |
LinkingTo | |
Suggests | testthat (>= 2.1.0), knitr, rmarkdown, htmltools, BiocStyle |
SystemRequirements | |
Enhances | |
URL | https://github.com/csoneson/ExploreModelMatrix |
BugReports | https://github.com/csoneson/ExploreModelMatrix/issues |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | ExploreModelMatrix_1.0.2.tar.gz |
Windows Binary | ExploreModelMatrix_1.0.2.zip |
macOS 10.13 (High Sierra) | ExploreModelMatrix_1.0.2.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/ExploreModelMatrix |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/ExploreModelMatrix |
Package Short Url | https://bioconductor.org/packages/ExploreModelMatrix/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.11 | Source Archive |
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