plsda_scores_plot {structToolbox}R Documentation

plsda_scores_plot class

Description

2d scatter plot of plsda component scores.

Usage

plsda_scores_plot(
  components = c(1, 2),
  points_to_label = "none",
  factor_name,
  ...
)

Arguments

components

The PLS components to plot (numeric(2))

points_to_label

"none", "all", or "outliers" will be labelled on the plot.

factor_name

The sample_meta column name for labelling the legend

...

additional slots and values passed to struct_class

Value

struct object

Examples

D = iris_DatasetExperiment()
M = mean_centre()+PLSDA(factor_name='Species')
M = model_apply(M,D)

C = plsda_scores_plot(factor_name='Species')
chart_plot(C,M[2])

[Package structToolbox version 1.0.1 Index]