cluster2pattern {projectR} | R Documentation |
Function to make patterns of continuous weights from clusters.
cluster2pattern(clusters, NP, Data, ...) ## S4 method for signature 'kmeans' cluster2pattern(clusters, Data) ## S4 method for signature 'hclust' cluster2pattern(clusters, NP, Data = NA)
clusters |
a cluster object which could be either an hclust or a kmeans object |
NP |
number of desired patterns |
Data |
data used to make clusters object |
... |
Additional arguments to cluster2pattern |
An object of class pclust containing pattern weights corresponding for each cluster.
k.RNAseq6l3c3t<-kmeans(p.RNAseq6l3c3t,22) cluster2pattern(clusters=k.RNAseq6l3c3t,NP=22,Data=p.RNAseq6l3c3t) distp <- dist(p.RNAseq6l3c3t) hc.RNAseq6l3c3t <- hclust(distp) cluster2pattern(clusters=hc.RNAseq6l3c3t,NP=22,Data=p.RNAseq6l3c3t)