save_gs {flowWorkspace} | R Documentation |
Save/load a GatingSet/GatingSetList which is the gated flow data including gates and populations to/from the disk.
The GatingSet
object The internal C data structure (gating tree),ncdfFlowSet
object(if applicable)
Retrieve sample names by scanning h5 files from a GatingSet folder
save_gs(gs, path, cdf = c("copy", "move", "skip", "symlink", "link"), ...) load_gs(path, h5_readonly = TRUE, select = character(), verbose = FALSE) ## S4 method for signature 'character' sampleNames(object) save_gslist(gslist, path, ...) load_gslist(path)
gs |
A |
path |
A character scalar giving the path to save/load the GatingSet to/from. |
cdf |
a character scalar. The valid options are :"copy","move","skip","symlink" specifying what to do with the cdf data file. Sometimes it is more efficient to move or create a symlink of the existing cdf file to the archived folder. It is useful to "skip" archiving cdf file if raw data has not been changed. |
... |
other arguments: not used. |
h5_readonly |
whether to open h5 data as read-only. Default is TRUE |
select |
an integer or character vector to select a subset of samples to load |
verbose |
logical flag to optionally print the versions of the libraries that were used to archive the GatingSet for troubleshooting purpose. |
object |
a |
gslist |
A |
GatingSet-class
,GatingSetList-class
## Not run: #G is a GatingSet save_gs(G,path="tempFolder") G1<-load_gs(path="tempFolder") #G is a GatingSet save_gslist(gslist1,path="tempFolder") gslist2<-load_gslist(path="tempFolder") ## End(Not run) ## Not run: sampleNames(gsdir) ## End(Not run)