plotCeldaViolin {celda} | R Documentation |
Outputs a violin plot for feature expression data.
plotCeldaViolin( counts, celdaMod, features, exactMatch = TRUE, plotDots = TRUE, dotSize = 0.1 )
counts |
Integer matrix. Rows represent features and columns represent cells. |
celdaMod |
Celda object of class "celda_G" or "celda_CG". |
features |
Character vector. Uses these genes for plotting. |
exactMatch |
Logical. Whether an exact match or a partial match using
|
plotDots |
Boolean. If |
dotSize |
Numeric. Size of points if |
Violin plot for each feature, grouped by celda cluster
data(celdaCGSim, celdaCGMod) plotCeldaViolin( counts = celdaCGSim$counts, celdaMod = celdaCGMod, features = "Gene_1" )