artmsQuantification {artMS} | R Documentation |
Relative quantification using MSstats including:
plots
quantifications (log2fc, pvalues, etc)
normalized abundance values
artmsQuantification(yaml_config_file, data_object = FALSE, verbose = TRUE)
yaml_config_file |
(char) The yaml file name and location |
data_object |
(logical) flag to indicate whether the configuration file is a string to a file that should be opened or |
verbose |
(logical) |
The relative quantification of the conditions and comparisons specified in the keys/contrast file resulting from running MSstats, in addition to quality control plots (if selected)
artmsQuantification("artms-ab-config.yaml")