getGAlignmentsPairs {ORFik}R Documentation

Internal GAlignmentPairs loader from fst data.frame

Description

Internal GAlignmentPairs loader from fst data.frame

Usage

getGAlignmentsPairs(df)

Arguments

df

a data.frame with columns minimum 6 columns: seqnames, start1/start2 (integers), cigar1/cigar2 and strand
Additional columns will be assigned as meta columns

Value

GAlignmentPairs object


[Package ORFik version 1.8.6 Index]