mulFSG {Mulcom} | R Documentation |
Calculate the False Significant Genes for m and t defined by the user
mulFSG(Mulcom_P, m, t)
Mulcom_P |
an object of class MULCOM |
m |
m: a numeric value corresponding to log 2 ratio correction for MulCom Test |
t |
t: a numeric value corresponding to t values for MulCom Test |
mulFDR
evaluate the False Significant genes on the Mulcom_P object
according to specific m and t parameters. For each permutation
it is calculated the number of positive genes. An estimation of the false
called genes is evaluated with the median for each experimental subgroups
Claudio Isella, claudio.isella@ircc.it
data(benchVign) mulcom_perm <- mulPerm(Affy, Affy$Groups, 10, 7) mulcom_fsg <- mulFSG(mulcom_perm, 0.2, 2)