stat_rare {MicrobiotaProcess}R Documentation

mapping data of ggrarecurve

Description

generating the data of ggrarecurve.

Usage

stat_rare(data, chunks = 400, sampleda, factorLevels, plotda = TRUE)

Arguments

data

data.frame,(nrow sample * ncol taxonomy (feature) or and factor)

chunks

integer, the number of subsample in a sample, default is 400.

sampleda

data.frame, (nrow sample * ncol factor)

factorLevels

list, the levels of the factors, default is NULL, if you want to order the levels of factor, you can set this.

plotda

boolean, default is TRUE, whether build the data.frame for 'geom_bar' of 'ggplot2'.

Value

data.frame for ggrarecurve.

Author(s)

Shuangbin Xu


[Package MicrobiotaProcess version 1.0.5 Index]