workedExampleNotNormalizedData {MiChip} | R Documentation |
Loads a set of hybridizations into a matrix and them proceeds to filter and summarize these data
workedExampleNotNormalizedData(exptname, intensityCutoff=0, datadir=".", minSumlength, madAdjust = FALSE )
exptname |
string indicating the name of the experiment |
intensityCutoff |
The intensity value for accepting the spots intensity value in the experment |
datadir |
The directory contain data from the experiment |
minSumlength |
Minimum exceptable number of values to summarize intensity value. |
madAdjust |
if |
#Summarizes the data in the current directory ## Not run: mySummarizedEset <-workedExampleNotNormalizedData("MyExpt", intensityCutoff=0, datadir=".", minSumlength=0, madAdjust=TRUE) ## End(Not run)