cirPlot4pathway {BioMM} | R Documentation |
Plot the individual CpGs within a given set of pathways. The significance of the CpGs are illustrated by the negative log P value.
cirPlot4pathway(datalist, topPathID, core = MulticoreParam(), fileName = NULL)
datalist |
The input data list containing ordered collections of matrices. |
topPathID |
A predefined pathway IDs. |
core |
The number of cores used for computation. (Default: 10) |
fileName |
The plot file name. (Default: 'cpgTopGOplot.png') |
Top 10 or 20 pathways are usually suggested to be visualized.
An output image file.