BgeeMetadata-class {BgeeCall} | R Documentation |
An S4 class that contains all information to retrieve intergenic regions generated by Bgee.
intergenic_release
Bgee intergenic release that will be used
all_releases
list of all reference intergenic releases that can be used to generate your present/absent expression calls.
intergenic_prefix
String used to generate an intergenic release specific output directory
custom_intergenic_path
path to a local version of reference intergenic fasta file. If NULL (by default) the reference intergenic fasta file will be downloaded. If not NULL BgeeCall will merge this local reference intergenic file with the transcriptome. Except if you generated your own intergenic regions always keep it NULL.