This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see cgdv17.
Bioconductor version: 3.10
Complete Genomics Diversity Panel, chr17 on 46 individuals
Author: VJ Carey <stvjc at channing.harvard.edu>
Maintainer: VJ Carey <stvjc at channing.harvard.edu>
Citation (from within R,
enter citation("cgdv17")
):
To install this package, start R (version "3.6") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("cgdv17")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("cgdv17")
R Script | cgdv17: extract from Complete Genomics diversity panel | |
Reference Manual |
biocViews | BiocViews, ExperimentData, SNPData, SequencingData |
Version | 0.24.0 |
License | Artistic-2.0 |
Depends | R (>= 2.15), methods, VariantAnnotation(>= 1.15.15) |
Imports | BiocGenerics, S4Vectors, IRanges, GenomicRanges, Biobase |
LinkingTo | |
Suggests | parallel, GGtools, TxDb.Hsapiens.UCSC.hg19.knownGene, org.Hs.eg.db, illuminaHumanv1.db |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | variants |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | cgdv17_0.24.0.tar.gz |
Windows Binary | |
Mac OS X 10.11 (El Capitan) | |
Source Repository | git clone https://git.bioconductor.org/packages/cgdv17 |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/cgdv17 |
Package Short Url | https://bioconductor.org/packages/cgdv17/ |
Package Downloads Report | Download Stats |
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