This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see FunciSNP.data.
Bioconductor version: 3.10
Data sets needed for FunciSNP to integrate information from GWAS, 1000genomes and chromatin feature, in order to identify functional SNP in coding or non-coding regions.
Author: Simon G. Coetzee <simon at simoncoetzee.com> and Houtan Noushmehr, PhD <houtan at usp.br>
Maintainer: Simon G. Coetzee <scoetzee at gmail.com>
Citation (from within R,
enter citation("FunciSNP.data")
):
To install this package, start R (version "3.6") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("FunciSNP.data")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("FunciSNP.data")
R Script | FunciSNP Vignette | |
Reference Manual | ||
Text | NEWS |
biocViews | ENCODE, ExperimentData, Project1000genomes, SNPData |
Version | 1.22.0 |
License | GPL-3 |
Depends | R (>= 2.14.0), IRanges |
Imports | rtracklayer |
LinkingTo | |
Suggests | |
SystemRequirements | |
Enhances | |
URL | http://coetzeeseq.usc.edu/publication/Coetzee_SG_et_al_2012/ |
Depends On Me | FunciSNP |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | FunciSNP.data_1.22.0.tar.gz |
Windows Binary | |
Mac OS X 10.11 (El Capitan) | |
Source Repository | git clone https://git.bioconductor.org/packages/FunciSNP.data |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/FunciSNP.data |
Package Short Url | https://bioconductor.org/packages/FunciSNP.data/ |
Package Downloads Report | Download Stats |
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