This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see rpx.
Bioconductor version: 3.10
The rpx package implements an interface to proteomics data submitted to the ProteomeXchange consortium.
Author: Laurent Gatto
Maintainer: Laurent Gatto <laurent.gatto at uclouvain.be>
Citation (from within R,
enter citation("rpx")
):
To install this package, start R (version "3.6") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("rpx")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("rpx")
HTML | R Script | An R interface to the ProteomeXchange repository |
Reference Manual | ||
Text | NEWS |
biocViews | DataImport, ImmunoOncology, MassSpectrometry, Proteomics, Software, ThirdPartyClient |
Version | 1.22.0 |
In Bioconductor since | BioC 2.14 (R-3.1) (6 years) |
License | GPL-2 |
Depends | methods |
Imports | xml2, RCurl, utils |
LinkingTo | |
Suggests | MSnbase, Biostrings, BiocStyle, testthat, knitr |
SystemRequirements | |
Enhances | |
URL | https://github.com/lgatto/rpx |
BugReports | https://github.com/lgatto/rpx/issues |
Depends On Me | proteomics |
Imports Me | MBQN, proteoQC |
Suggests Me | MSnbase, RforProteomics |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | rpx_1.22.0.tar.gz |
Windows Binary | rpx_1.22.0.zip (32- & 64-bit) |
Mac OS X 10.11 (El Capitan) | rpx_1.22.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/rpx |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/rpx |
Package Short Url | https://bioconductor.org/packages/rpx/ |
Package Downloads Report | Download Stats |
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