This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see RchyOptimyx.
Bioconductor version: 3.10
Constructs a hierarchy of cells using flow cytometry for maximization of an external variable (e.g., a clinical outcome or a cytokine response).
Author: Adrin Jalali, Nima Aghaeepour
Maintainer: Adrin Jalali <adrin.jalali at gmail.com>, Nima Aghaeepour <naghaeep at gmail.com>
Citation (from within R,
enter citation("RchyOptimyx")
):
To install this package, start R (version "3.6") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("RchyOptimyx")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("RchyOptimyx")
R Script | flowType package | |
Reference Manual | ||
Text | NEWS |
biocViews | FlowCytometry, Software |
Version | 2.26.0 |
In Bioconductor since | BioC 2.10 (R-2.15) (8 years) |
License | Artistic-2.0 |
Depends | R (>= 2.10) |
Imports | Rgraphviz, sfsmisc, graphics, methods, graph, grDevices, flowType(>= 2.0.0) |
LinkingTo | |
Suggests | flowCore |
SystemRequirements | |
Enhances | |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | RchyOptimyx_2.26.0.tar.gz |
Windows Binary | RchyOptimyx_2.26.0.zip |
Mac OS X 10.11 (El Capitan) | RchyOptimyx_2.26.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/RchyOptimyx |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/RchyOptimyx |
Package Short Url | https://bioconductor.org/packages/RchyOptimyx/ |
Package Downloads Report | Download Stats |
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