LVSmiRNA

DOI: 10.18129/B9.bioc.LVSmiRNA    

This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see LVSmiRNA.

LVS normalization for Agilent miRNA data

Bioconductor version: 3.10

Normalization of Agilent miRNA arrays.

Author: Stefano Calza, Suo Chen, Yudi Pawitan

Maintainer: Stefano Calza <stefano.calza at unibs.it>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("LVSmiRNA")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("LVSmiRNA")

 

PDF	R Script	LVSmiRNA.pdf
PDF		Reference Manual
Text		NEWS

Details

biocViews	AgilentChip, Microarray, OneChannel, Preprocessing, Software
Version	1.36.0
In Bioconductor since	BioC 2.7 (R-2.12) (9.5 years)
License	GPL-2
Depends	R (>= 3.1.0), methods, splines
Imports	BiocGenerics, stats4, graphics, stats, utils, MASS, Biobase, quantreg, limma, affy, SparseM, vsn, zlibbioc
LinkingTo
Suggests
SystemRequirements
Enhances	parallel, snow, Rmpi
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Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	LVSmiRNA_1.36.0.tar.gz
Windows Binary	LVSmiRNA_1.36.0.zip (32- & 64-bit)
Mac OS X 10.11 (El Capitan)	LVSmiRNA_1.36.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/LVSmiRNA
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/LVSmiRNA
Package Short Url	https://bioconductor.org/packages/LVSmiRNA/
Package Downloads Report	Download Stats