This package is for version 3.10 of Bioconductor; for the stable, up-to-date release version, see Imetagene.
Bioconductor version: 3.10
This package provide a graphical user interface to the metagene package. This will allow people with minimal R experience to easily complete metagene analysis.
Author: Audrey Lemacon <audrey.lemacon.1 at ulaval.ca>, Charles Joly Beauparlant <charles.joly-beauparlant at crchul.ulaval.ca>, Arnaud Droit <arnaud.droit at crchuq.ulaval.ca>
Maintainer: Audrey Lemacon <audrey.lemacon.1 at ulaval.ca>
Citation (from within R,
enter citation("Imetagene")
):
To install this package, start R (version "3.6") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("Imetagene")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Imetagene")
HTML | R Script | Presentation of Imetagene |
Reference Manual | ||
Text | NEWS | |
Text | LICENSE |
biocViews | Alignment, ChIPSeq, Coverage, Genetics, MultipleComparison, Sequencing, Software |
Version | 1.16.0 |
In Bioconductor since | BioC 3.2 (R-3.2) (4.5 years) |
License | Artistic-2.0 | file LICENSE |
Depends | R (>= 3.2.0), metagene, shiny |
Imports | d3heatmap, shinyBS, shinyFiles, shinythemes, ggplot2 |
LinkingTo | |
Suggests | knitr, BiocStyle, rmarkdown |
SystemRequirements | |
Enhances | |
URL | |
BugReports | https://github.com/andronekomimi/Imetagene/issues |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | Imetagene_1.16.0.tar.gz |
Windows Binary | Imetagene_1.16.0.zip (32- & 64-bit) |
Mac OS X 10.11 (El Capitan) | Imetagene_1.16.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/Imetagene |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/Imetagene |
Package Short Url | https://bioconductor.org/packages/Imetagene/ |
Package Downloads Report | Download Stats |
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