Stepwise normalization functions for cDNA microarrays

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Documentation for package ‘stepNorm’ version 1.58.0

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calcAIC Extract AIC from a Fitted Model
calcBIC Extract BIC from a Fitted Model
fit2DWithin Bivariate location normalization function for cDNA microarray data
fitWithin Simple location normalization function for cDNA microarray data
maCompPlate2 Generate plate IDs
makeStepList Construction of a stepwise normalization list
marrayFit Class "marrayFit", storing parameters and results of post-normalization cDNA microarray data
marrayFit-class Class "marrayFit", storing parameters and results of post-normalization cDNA microarray data
seqWithinNorm Sequential within-slide normalization function
stepWithinNorm Stepwise within-slide normalization function
withinNorm Within-slide normalization function for cDNA spotted microarrays