toW4M {ropls} | R Documentation |
The 3 .tsv files are written with the indicated file
prefix, and
'_dataMatrix.tsv', '_sampleMetadata.tsv', and '_variableMetadata.tsv'
suffices, respectively. Note that the dataMatrix
is transposed before
export (e.g., the samples are written column wise in the 'dataMatrix.tsv'
exported file).
toW4M(eset, ...) ## S4 method for signature 'ExpressionSet' toW4M(eset, filePrefixC = paste0(getwd(), "/out_"), verboseL = TRUE, ...)
eset |
An S4 object of class |
... |
Currently not used. |
filePrefixC |
Character: common prefix (including repository full path) of the three file names: for example, the 'c:/mydata/setname' value will result in writting the 'c:/mydata/setname_dataMatrix.tsv', 'c:/mydata/setname_sampleMetadata.tsv', and 'c:/mydata/setname_variableMetadata.tsv' files. |
verboseL |
Logical: should comments be printed? |
No object returned.
Etienne Thevenot, etienne.thevenot@cea.fr
sacSet <- fromW4M(file.path(path.package("ropls"), "extdata")) toW4M(sacSet)