export3Cseq2bedGraph {r3Cseq} | R Documentation |
export interaction regions from RagedData to the bedGraph format, which suitable for uploading to the UCSC genome browser
export3Cseq2bedGraph(object,datatype=c("rpm","read_count"))
object |
r3Cseq object, The object might contain the interaction regions generated by function getInteractions |
datatype |
read_count : read count per restriction fragment rpm : normalized read per million per restriction fragment |
The text file in 'bedGraph' format
S. Thongjuea
#See the vignette