graph {perturbatr} | R Documentation |
Returns the graph that has been used for analysis using network diffusion.
graph(obj) ## S4 method for signature 'NetworkAnalysedPerturbationData' graph(obj)
obj |
the object for which you want to extract the underlying graph |
returns a igraph
object
data(rnaiscreen) ft <- hm(rnaiscreen) gr <- readRDS(system.file( "extdata", "graph_small.rds", package = "perturbatr")) diffu <- diffuse(ft, gr, r=1) graph(diffu)