plot_constraint_fulfillment,Primers-method {openPrimeR}R Documentation

Overview of Constraint Fulfillment.

Description

Plots an overview of which primers passed the filtering constraints and which primers did not.

Usage

## S4 method for signature 'Primers'
plot_constraint_fulfillment(primers, settings,
  active.constraints, plot.p.vals = TRUE)

Arguments

primers

A Primers object.

settings

A DesignSettings object.

active.constraints

The identifiers of constarints to be plotted for fulfillment.

plot.p.vals

Show p-value from Fisher's exact test for the significance of primer constraint fulfillment in comparison to reference primer sets.

Value

A data frame with statistics on fulfilled constraints.


[Package openPrimeR version 1.8.0 Index]