miRNA_NameToAccession {miRBaseConverter} | R Documentation |
This function converts a group of any species' miRNA name to the Accessions defined in miRBase.
miRNA_NameToAccession(miRNANames, version = "v22")
miRNANames |
A character vector representing the source miRNA names needed to be convert. |
version |
A character value representing the version corresponding the miRNANames.
Users can apply the function getAllVersionInfo() to get the available miRNA version names.
The optional values are in below: |
A nx2 data frame. The number of rows equal to the input miRNA names. The two columns are defined as below:
miRNAName_{Version} : The input miRNA names (Column 1).
Accession : The convert Accession(Column 2).
Xu, Taosheng taosheng.x@gmail.com
data(miRNATest) miRNANames=miRNATest$miRNA_Name version=checkMiRNAVersion(miRNANames,verbose=TRUE) result1=miRNA_NameToAccession(miRNANames,version=version) result2=miRNA_AccessionToName(result1[,2],targetVersion="v22") result3=miRNAVersionConvert(miRNANames,targetVersion="v22",exact=TRUE)