claudinLowData {genefu}R Documentation

claudinLowData for use in the claudinLow classifier. Data generously provided by Aleix Prat.

Description

Training and Testing Data for use with the Claudin-Low Classifier

Usage

data(claudinLowData)

Format

claudinLowData is a dataset containing one list with six sublists:

claudinLowData

xd: Matrix of 807 features and 52 samples. classes: factor to split samples. nfeatures: number of features. nsamples: number of samples. fnames: names of features. snames: names of samples.

Source

http://www.biomedcentral.com/content/pdf/bcr2635.pdf

References

Aleix Prat, Joel S Parker, Olga Karginova, Cheng Fan, Chad Livasy, Jason I Herschkowitz, Xiaping He, and Charles M. Perou (2010) "Phenotypic and molecular characterization of the claudin-low intrinsic subtype of breast cancer", Breast Cancer Research, 12(5):R68

See Also

claudinLow

Examples

data(claudinLowData)
str(claudinLowData)
sapply(claudinLowData, head)

[Package genefu version 2.18.1 Index]