plotBranchHeatmap {flowSpy}R Documentation

Visualization heatmap of branch data of FSPY

Description

Visualization heatmap of branch data of FSPY

Usage

plotBranchHeatmap(
  object,
  color = colorRampPalette(c("blue", "white", "red"))(100),
  scale = "row",
  ...
)

Arguments

object

An FSPY object

color

vector. Colors used in heatmap.

scale

character. Whether the values should be centered and scaled in either the row direction or the column direction, or none. Corresponding values are "row", "column" and "none"

...

options to pass on to the pheatmap function.

Value

ggplot2 figure

Examples


if (FALSE) {

plotBranchHeatmap(fspy)
plotBranchHeatmap(fspy, color = colorRampPalette(c("purple","white","yellow"))(100))
plotBranchHeatmap(fspy, cluster_row = FALSE)
plotBranchHeatmap(fspy, cluster_row = FALSE, cluster_col = FALSE)

}


[Package flowSpy version 1.0.4 Index]