plotPseudotimeDensity {flowSpy} | R Documentation |
plot Pseudotime density of FSPY
plotPseudotimeDensity( object, color.by = "stage", main = "Density of pseudotime", adjust = 0.5, plot.theme = theme_bw() )
object |
an FSPY object |
color.by |
character. |
main |
character. Title of the plot |
adjust |
numeric. A multiplicate bandwidth adjustment. |
plot.theme |
themes from |
ggplot2 figure
if (FALSE) { plotPseudotimeDensity(fspy) plotPseudotimeDensity(fspy, adjust = 1) plotPseudotimeDensity(fspy, adjust = 2) plotPseudotimeDensity(fspy, adjust = 2) + scale_color_manual(values = c("#00599F","#FF3222","#009900", "#FF9933","#FF99FF","#7A06A0")) }