celdaProbabilityMap,celda_C-method {celda} | R Documentation |
Renders probability and relative expression heatmaps to visualize the relationship between cell populations and samples.
## S4 method for signature 'celda_C' celdaProbabilityMap(counts, celdaMod, level = c("sample"), ...)
counts |
Integer matrix. Rows represent features and columns represent cells. This matrix should be the same as the one used to generate 'celdaMod'. |
celdaMod |
Celda object of class 'celda_C'. |
level |
Character. 'sample' will display the absolute probabilities and relative normalized abundance of each cell population in each sample. Default 'sample'. |
... |
Additional parameters. |
A grob containing the specified plots
'celda_C()' for clustering cells
data(celdaCSim, celdaCMod) celdaProbabilityMap(celdaCSim$counts, celdaCMod)