plot.bioTMLE {biotmle} | R Documentation |
Histogram of raw or FDR-adjusted p-values from the moderated t-test.
## S3 method for class 'bioTMLE' plot(x, ..., type = "pvals_adj")
x |
object of class |
... |
additional arguments passed |
type |
character describing whether to provide a plot of unadjusted or adjusted p-values (adjustment performed via Benjamini-Hochberg) |
object of class ggplot
containing a histogram of the raw or
Benjamini-Hochberg corrected p-values (depending on user input).
library(dplyr) library(biotmleData) library(SummarizedExperiment) data(biomarkertmleOut) limmaTMLEout <- modtest_ic(biotmle = biomarkerTMLEout) plot(x = limmaTMLEout, type = "pvals_adj") #