getTxdbFeaturesFromGRanges {RCAS} | R Documentation |
This function takes as input a GRanges object that contains GTF file contents
(e.g from the output of importGtf
function).
Then extracts the coordinates of gene features
such as promoters, introns, exons, 5'/3' UTRs and
whole transcripts.
getTxdbFeaturesFromGRanges(gffData)
gffData |
A GRanges object imported by |
A list of GRanges objects
data(gff) txdbFeatures <- getTxdbFeaturesFromGRanges(gffData = gff)